stLearn
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API
Wrapper functions:
wrapper
Add:
add
Preprocessing:
pp
Embedding:
em
Spatial:
spatial
stlearn.spatial.clustering.localization
stlearn.spatial.trajectory.pseudotime
stlearn.spatial.trajectory.pseudotimespace_global
stlearn.spatial.trajectory.pseudotimespace_local
stlearn.spatial.trajectory.compare_transitions
stlearn.spatial.trajectory.detect_transition_markers_clades
stlearn.spatial.trajectory.detect_transition_markers_branches
stlearn.spatial.trajectory.set_root
stlearn.spatial.morphology.adjust
stlearn.spatial.SME.SME_impute0
stlearn.spatial.SME.pseudo_spot
stlearn.spatial.SME.SME_normalize
Tools:
tl
Plot:
pl
Tools:
datasets
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stLearn
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stlearn.spatial.trajectory.pseudotime
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