stlearn.add.add_deconvolution

stlearn.add.add_deconvolution(adata: AnnData, annotation_path: Path | str, copy: bool = False) → AnnData | None

Adding label transfered from Seurat

Parameters:

• adata – Annotated data matrix.

• annotation_path – Path of the output of label transfer result by Seurat

• copy – Return a copy instead of writing to adata.

Returns:

• Depending on copy, returns or updates adata with the following fields.

• **[cluster method name]_anno** (adata.obs field) – The annotation of cluster results.