stlearn.pl.trajectory.de_transition_plot¶

stlearn.pl.trajectory.de_transition_plot(adata: AnnData, top_genes: int = 10, font_size: int = 6, name: str | None = None, dpi: int = 150, output: str | None = None) → AnnData | None[source]¶

Differential expression between transition markers.

Parameters:

adata – Annotated data matrix.
top_genes – Number of genes using to plot.
font_size – Size of the font.
name – Name of the output figure file.
dpi – DPI of the output figure.
output – Save the figure as file or not.

Return type:

Figure object