stlearn.add.annotation

stlearn.add.annotation(adata: AnnData, label_list: list[str], use_label: str = 'leiden', copy: bool = False) → AnnData | None

Adding annotation for cluster

Parameters:

• adata – Annotated data matrix.

• label_list – List of the labels which assigned to current cluster result.

• use_label – Choosing cluster type.

• copy – Return a copy instead of writing to adata.

Returns:

• Depending on copy, returns or updates adata with the following fields.

• **[cluster method name]_anno** (adata.obs field) – The annotation of cluster results.